Evolution
How variation, heredity and selection account for adaptation and the diversity of life, and the evidence that settled the argument.
What needs explaining
Two facts about living things demand an account: they fit their circumstances with an accuracy that looks designed, and they fall into a nested pattern of similarity that design has no reason to produce.
Deep time and extinction
Whether a slow mechanism is available at all is a question for geology and physics, and the answers arrived in the wrong order: extinction first, an ancient earth second, and the numbers only in the twentieth century.
Darwin's argument
The Origin of Species is one long argument from four premises nobody disputed to a conclusion almost nobody accepted, and its weakest joint is the one Darwin knew least about.
The heredity problem
If inheritance blends, natural selection destroys the variation it feeds on within a few generations, and the experiment that solved the problem had already been published and ignored.
Populations and frequencies
Mendelian heredity conserves variation by itself, which turns evolution from a story about individuals into a measurable quantity: the frequency of an allele in a population.
How fast selection works
Break one Hardy-Weinberg assumption and the population starts to move, at a rate the algebra predicts and two field cases let you check against real frequencies.
Where variation comes from
Selection is a filter and cannot make what it sorts, so the theory needs a source of new alleles: a measurable rate of copying error that arrives before the challenge rather than in response to it.
Chance and drift
In a finite population allele frequencies wander whether or not anything is selecting them, which decides the fate of most new mutations and predicts a molecular clock.
What a species is
A lineage that only changes gives one species at a time, so diversity requires splitting, and splitting means the evolution of barriers to interbreeding.
The shape of history
If lineages split and rarely rejoin, the history of life is a tree, and that is a testable claim because thousands of independent characters must agree on which tree it is.
Reading the fossil record
The record is spectacularly incomplete, which is why a fossil found by predicting where it must lie is worth more than any number found by luck.
Evidence in the genome
Every organism carries a complete record of its ancestry, and the decisive entries in it are not the working parts but the shared mistakes, which common design has no reason to copy.
Evolution in real time
The process is fast enough to measure while somebody is watching, which turns the theory from a reconstruction of the past into a quantitative tool with a bill attached.
The limits of the theory
Constraint, history and chance bound what selection can build, the standing objections resolve into the theory rather than against it, and several real arguments about it are still open.
The whole subject